Publications 2003-2015

2015

Andersen Ø, Johnsen H, De Rosa MC, Præbel K, Stjelja S, Kirubakaran TG, Pirolli D, Jentoft S, Fevolden SE (2015) Evolutionary history and adaptive significance of the polymorphic Pan I in migratory and stationary populations of Atlantic cod (Gadus morhua). Marine Genomics 22:45-54 doi:10.1016/j.margen.2015.03.009
Barson N, Aykanat T, Hindar K, Baranski M, Bolstad GH, Fiske P, Jacq C, Jensen AJ, Johnston SE, Karlsson S, Kent MP, Moen T, Niemela E, Nome T, Næsje T, Orell P, Romakkaniemi A, Sægrov H, Urdal K, Erkinaro J, Lien S, Primmer CR (2015) Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon. Nature 528:405-408 doi:10.1038/nature16062
Berg PR, Jentoft S, Star B, Ring KH, Knutsen H, Lien S, Jakobsen KS, Andre C (2015) Adaptation to Low Salinity Promotes Genomic Divergence in Atlantic Cod (Gadus morhua L.). Genome Biology and Evolution 7:1644-1663 doi:10.1093/gbe/evv093
Besnier F, Glover K, Lien S, Kent MP, Hansen MM, Shen X, Skaala Ø (2015) Identification of quantitative genetic components of fitness variation in farmed, hybrid and native salmon in the wild. Heredity 115:47-55 doi:10.1038/hdy.2015.15
Bruun J, Kolberg M, Ahlquist TC, Røyrvik EC, Nome T, Leithe E, Lind GE, Merok MA, Rognum TO, Bjørkøy G, Johansen T, Lindblom A, Sun XF, Svindland A, Liestøl K, Nesbakken A, Skotheim RI, Lothe RA (2015) Regulator of Chromosome Condensation 2 Identifies High-Risk Patients within Both Major Phenotypes of Colorectal Cancer. Clinical Cancer Research 21:3759-3770 doi:10.1158/1078-0432.CCR-14-3294
Cooper J, Vik JO, Waltemath D (2015) A call for virtual experiments: Accelerating the scientific process. Progress in Biophysics and Molecular Biology 117:99-106 doi:10.1016/j.pbiomolbio.2014.10.001
Davik J, Sargent DJ, Brurberg MB, Lien S, Kent MP, Alsheikh MK (2015) A ddRAD based linkage map of the cultivated Strawberry, Fragaria xananassa. PLoS ONE 10:10 pages doi:10.1371/journal.pone.0137746
Delhomme N, Sundström G, Zamani N, Lantz H, Lin YC, Hvidsten TR, Höppner MP, Jern P, Van de Peer Y, Lundeberg J, Grabherr MG, Street N (2015) Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies). PLoS ONE 10:e0139080: doi:10.1371/journal.pone.0139080
Fjellheim S, Tanhuanpää P, Marum P, Manninen O, Rognli OA (2015) Phenotypic or molecular diversity screening for conservation of genetic resources? An example from a genebank collection of the temperate forage grass timothy. Crop science 55:1646-1659 doi:10.2135/cropsci2014.12.0825
Gonen S, Baranski M, Thorland I, Norris A, Grove H, Arnesen P, Bakke H, Lien S, Bishop SC, Houston R (2015) Mapping and validation of a major QTL affecting resistance to pancreas disease (salmonid alphavirus) in Atlantic salmon (Salmo salar). Heredity 115:405-414 doi:10.1038/hdy.2015.37
Hoff AM, Johannessen B, Alagaratnam S, Zhao S, Nome T, Løvf M, Bakken AC, Hektoen M, Sveen A, Lothe RA, Skotheim RI (2015) Novel RNA variants in colorectal cancers. OncoTarget 6:36587-36602 doi:10.18632/oncotarget.5500
Ibstedt S, Stenberg S, Bages S, Gjuvsland AB, Salinas F, Kourtchenko O, Samy JK, Blomberg A, Omholt SW, Liti G, Beltran G, Warringer J (2015) Concerted Evolution of Life Stage Performances Signals Recent Selection on Yeast Nitrogen Use. Molecular biology and evolution 32:153-161 doi:10.1093/molbev/msu285
Kousoulaki K, Østbye TKK, Krasnov A, Torgersen JS, Mørkøre T, Sweetman JW (2015) Metabolism, health and fillet nutritional quality in Atlantic salmon (Salmo salar) fed diets containing n-3-rich microalgae. Journal of Nutritional Science 4:1-13 doi:10.1017/jns.2015.14
Kovi MR, Fjellheim S, Sandve SR, Larsen A, Rudi H, Asp T, Kent MP, Rognli OA (2015) Population structure, genetic variation and linkage disequilibrium in perennial ryegrass populations divergently selected for freezing tolerance. Frontiers in Plant Science 6: doi:10.3389/fpls.2015.00929
Moen T, Torgersen JS, Santi N, Davidson WS, Baranski M, Ødegård J, Kjøglum S, Velle B, Kent MP, Lubieniecki KP, Isdal E, Lien S (2015) Epithelial cadherin determines resistance to infectious pancreatic necrosis virus in Atlantic salmon. Genetics 200:1313-1326 doi:10.1534/genetics.115.175406
Nordbø Ø, Gjuvsland AB, Nermoen A, Land S, Niederer S, Lamata P, Lee J, Smith NP, Omholt SW, Vik JO (2015) Towards causally cohesive genotype-phenotype modelling for characterization of the soft-tissue mechanics of the heart in normal and pathological geometries. Journal of the Royal Society Interface 12: doi:10.1098/rsif.2014.1166
Palti Y, Gao G, Liu S, Kent MP, Lien S, Miller MR, Rexroad III CE, Moen T (2015) The development and characterization of a 57K single nucleotide polymorphism array for rainbow trout. Molecular Ecology Resources 15:662-672 doi:10.1111/1755-0998.12337
Pocwierz-Kotus A, Kijewska A, Petereit C, Bernas R, Wiecaszek B, Arnyasi M, Lien S, Kent MP, Wenne R (2015) Genetic differentiation of brackish water populations of cod Gadus morhua in the southern Baltic, inferred from genotyping using SNP-arrays. Marine Genomics 19:17-22 doi:10.1016/j.margen.2014.05.010
Poćwierz-Kotus A, Bernaś R, Kent MP, Lien S, Leliüna E, Dębowski P, Wenne R (2015) Restitution and genetic differentiation of salmon populations in the southern Baltic genotyped with the Atlantic salmon 7K SNP array. Genetics Selection Evolution 47: doi:10.1186/s12711-015-0121-9
Saha A, Hauser L, Kent MP, Planque B, Neat F, Kirubakaran TG, Huse I, Homrum E, Fevolden SE, Lien S, Johansen T (2015) Seascape genetics of saithe (Pollachius virens) across the North Atlantic using single nucleotide polymorphisms. ICES Journal of Marine Science 72:2732-2741 doi:10.1093/icesjms/fsv139
Sandve SR, Hvidsten TR (2015) Om å overleve i en fryser. Aftenposten : doi:
Sandve SR, Hvidsten TR (2015) Hva er likheten mellom en rosinbolle og en laksefilet?. Aftenposten : doi:
Sandve SR, Marcussen T, Mayer KFX, Jakobsen KS, Heier L, Steuernagel B, Wulff BB, Olsen OA (2015) Chloroplast phylogeny of Triticum/Aegilops species is not incongruent with an ancient homoploid hybrid origin of the ancestor of the bread wheat D-genome. New Phytologist 208:9-10 doi:10.1111/nph.13487
Sundell D, Mannapperuma C, Netotea S, Delhomme N, Lin YC, Sjödin A, Van de Peer Y, Jansson S, Hvidsten TR, Street N (2015) The plant genome integrative explorer resource: PlantGenIE.org. New Phytologist 208:1149-1156 doi:10.1111/nph.13557

2014

Baranski M, Gopikrishna G, Robinson N, Katneni VK, Shekhar MS, Shanmugakarthik J, Jothivel S, Gopal C, Ravichandran P, Kent MP, Arnyasi M, Ponniah AG (2014) The development of a high density linkage map for black tiger shrimp (Penaeus monodon) based on cSNPs. PLoS ONE 9:e85413 doi:10.1371/journal.pone.0085413
Belova T, Grønvold L, Kumar A, Kianian S, He X, Lillemo M, Springer N, Lien S, Olsen OA, Sandve SR (2014) Utilization of deletion bins to anchor and order sequences along the wheat 7B chromosome. Theoretical and Applied Genetics 127:2029-2040 doi:10.1007/s00122-014-2358-z
Besnier F, Kent MP, Skern-Mauritzen R, Lien S, Malde K, Edvardsen R, Taylor S, Ljungfeldt L, Nilsen F, Glover K (2014) Human-induced evolution caught in action: SNP-array reveals rapid amphi-atlantic spread of pesticide resistance in the salmon ecotoparasite Lepeophtheirus salmonis. BMC Genomics :18 pages doi:10.1186/1471-2164-15-937
Drywa A, Pocwierz-Kotus A, Dobosz S, Kent MP, Lien S, Wenne R (2014) Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays. Marine Genomics 15:5-6 doi:10.1016/j.margen.2014.03.003
Fjellheim S, Boden S, Trevaskis B (2014) The role of seasonal flowering responses in adaptation of grasses to temperate climates. Frontiers in Plant Science 5:431 doi:10.3389/fpls.2014.00431
Helgeland H, Sandve SR, Torgersen J, Halle MK, Sundvold H, Omholt SW, Våge DI (2014) The evolution and functional divergence of the beta-carotene oxygenase gene family in teleost fish-Exemplified by Atlantic salmon. Gene 543:268-274 doi:10.1016/j.gene.2014.02.042
Johnston SE, Orell P, Pritchard VL, Kent MP, Lien S, Niemelä E, Erkinaro J, Primmer CR (2014) Genome-wide SNP analysis reveals a genetic basis for sea-age variation in a wild population of Atlantic salmon (Salmo salar). Molecular Ecology 23:3452-3468 doi:10.1111/mec.12832
Jørgensen SM, Castro V, Krasnov A, Torgersen J, Timmerhaus G, Hevrøy EM, Hansen TJ, Susort ST, Breck O, Takle HR (2014) Cardiac responses to elevated seawater temperature in Atlantic salmon. BMC Physiology 14:11 pages doi:10.1186/1472-6793-14-2
Karlsson S, Diserud OH, Moen T, Hindar K (2014) A standardized method for quantifying unidirectional genetic introgression. Ecology and Evolution 4:3256-3263 doi:10.1002/ece3.1169
Løvf M, Nome T, Bruun J, Eknæs M, Bakken AC, Mpindi JP, Kilpinen S, Rognum TO, Nesbakken A, Kallioniemi O, Lothe RA, Skotheim RI (2014) A novel transcript, VNN1-AB, as a biomarker for colorectal cancer. International Journal of Cancer 135:2077-2084 doi:10.1002/ijc.28855
Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M, The International Wheat Genom I, Jakobsen KS, Wulff BB, Steuernagel B, Mayer K, Olsen OA (2014) Ancient hybridizations among the ancestral genomes of bread wheat. Science 345: doi:10.1126/science.1250092
Mayer KF, Lukaszewski AJ, Alberti A, Sharpe A, Kilian A, Stanca AM, Keller B, Clavijo BJ, Friebe B, Gill B, Wulff B, Chapman B, Steuernagel B, Feuillet C, Viseux C, Pozniak C, Rokhsar DS, Klassen D, Edwards D, Akhunov E, Paux E, Alfama F, Choulet F, Kobayashi F, Muehlbauer GJ, Quesneville H, Simkova H, Rimbert H, Gundlach H, Budak H, Sakai H, Handa H, Kanamori H, Batley J, Vrana J, Rogers J, Cihalikova J, Dolezel J, Chapman J, Poland JA, Wu J, Khurana J, Wright J, Bader KC, Eversole K, Barry K, McLay K, Singh K, Clissold L, Pingault L, Couderc L, Cattivelli L, Spannagl M, Kubalakova M, Caccamo M, Mascher M, Bellgard M, Pfeifer M, Zytnicki M, Febrer M, Alaux M, Martis MM, Loaec M, Colaiacovo M, Singh NK, Glover N, Guilhot N, Stein N, Olsen OA, Maclachlan PR, Chhuneja P, Wincker P, Sourdille P, Faccioli P, Ramirez-Gonzalez RH, Waugh R, Sperkova R, Knox R, Appels R, Sharma S, Ayling S, Praud S, Wang S, Lien S, Sandve SR, Matsumoto T, Endo TR, Itoh T, Nussbaumer T, Wicker T, Tanaka T, Scholz U, Barbe V, Jamilloux V, Ogihara Y, Dubska Z (2014) A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science 345: doi:10.1126/science.1251788
Moore JS, Bourret V, Dionne M, Bradbury I, O’Reilly P, Kent MP, Chaput G, Bernatchez L (2014) Conservation genomics of anadromous Atlantic salmon across its North American range: Outlier loci identify the same patterns of population structure as neutral loci. Molecular Ecology 23:5680-5697 doi:10.1111/mec.12972
Mähler N, Cheregi O, Funk C, Netotea S, Hvidsten TR (2014) Synergy: A web resource for exploring gene regulation in Synechocystis sp. PCC6803. PLoS ONE 9:e113496 doi:10.1371/journal.pone.0113496
Netotea S, Sundell D, Street N, Hvidsten TR (2014) ComPlEx: conservation and divergence of co-expression networks in A. thaliana, Populus and O. sativa. BMC Genomics 15:17 pages doi:10.1186/1471-2164-15-106
Nome T, Hoff AM, Bakken AC, Rognum TO, Nesbakken A, Skotheim RI (2014) High frequency of fusion transcripts involving TCF7L2 in colorectal cancer: Novel fusion partner and splice variants. PLoS ONE 9:e91264 doi:10.1371/journal.pone.0091264
Nordbø Ø, Lamata P, Land S, Niederer SA, Aronsen JM, Louch WE, Sjaastad I, Martens H, Gjuvsland AB, Tøndel K, Torp H, Lohezic M, Schneider J, Remme EW, Smith NP, Omholt SW, Vik JO (2014) A computational pipeline for quantification of mouse myocardial stiffness parameters. Computers in Biology and Medicine 53:65-75 doi:10.1016/j.compbiomed.2014.07.013
Nossent JC, Sagen Johnsen S, Bakland G (2014) Tumor necrosis factor-α promoter -308/238 polymorphism association with less severe disease in ankylosing spondylitis is unrelated to serum TNF-α and does not predict TNF inhibitor response. Journal of Rheumatology 41:1675-1682 doi:10.3899/jrheum.131315
Pfeifer M, Kugler KG, Sandve SR, Zhan B, Rudi H, Hvidsten TR, Mayer KFX, Olsen OA (2014) Genome interplay in the grain transcriptome of hexaploid bread wheat. Science 345: doi:10.1126/science.1250091
Pocwierz-Kotus A, Bernas R, Debowski P, Kent MP, Lien S, Kesler M, Titov S, Leliuna E, Jespersen H, Drywa A, Wenne R (2014) Genetic differentiation of southeast Baltic populations of sea trout inferred from single nucleotide polymorphisms. Animal Genetics 45:96-104 doi:10.1111/age.12095
Robinson KM, Delhomme N, Mähler N, Schiffthaler B, Önskog J, Albrectsen BR, Ingvarsson PK, Hvidsten TR, Jansson S, Street NR (2014) Populus tremula (European aspen) shows no evidence of sexual dimorphism. BMC Plant Biology 14:276: doi:10.1186/s12870-014-0276-5
Robinson N, Baranski M, Mahapatra KD, Jatindra NS, Das S, Mishra J, Das P, Kent MP, Arnyasi M, Sahoo PK (2014) A linkage map of transcribed single nucleotide polymorphisms in rohu (Labeo rohita) and QTL associated with resistance to Aeromonas hydrophila. BMC Genomics 15: doi:10.1186/1471-2164-15-541
Sagen Johnsen S, Bakland G, Nossent JC (2014) The distribution of HLA-B27 subtype in patients with ankylosing spondylitis in Northern Norway. Scandinavian Journal of Rheumatology 43:296-300 doi:10.3109/03009742.2013.863381
Sandlund OT, Karlsson S, Thorstad EB, Berg OK, Kent MP, Norum ICJ, Hindar K (2014) Spatial and temporal genetic structure of a river-resident Atlantic salmon (Salmo salar) after millennia of isolation. Ecology and Evolution 4:1538-1554 doi:10.1002/ece3.1040
Sandve SR, Hvidsten TR (2014) Bjørgen-koden. Aftenposten Viten : doi:
Torgersen J, Koppang EO, Stien LH, Kohler A, Pedersen ME, Mørkøre T (2014) Soft texture of Atlantic salmon fillets is associated with glycogen accumulation. PLoS ONE 9:e85551 doi:10.1371/journal.pone.0085551
Våge DI, Nieminen M, Andersson DG, Røed KH (2014) Two missense mutations in melanocortin 1 receptor (MC1R) are strongly associated with dark ventral coat color in reindeer (Rangifer tarandus).. Animal Genetics 45:750-753 doi:10.1111/age.12187
Zueva KJ, Lumme J, Veselov AE, Kent MP, Lien S, Primmer CR (2014) Footprints of directional selection in wild atlantic salmon populations: Evidence for parasite-driven evolution?. PLoS ONE 9:e91672 doi:10.1371/journal.pone.0091672
Ødegård J, Moen T, Santi N, Korsvoll SA, Kjøglum S, Meuwissen T (2014) Genomic prediction in an admixed population of Atlantic salmon (Salmo salar). Frontiers in Genetics 5:402 doi:10.3389/fgene.2014.00402

2003-2013

Arnyasi M, Komlosi I, Kent MP, Czegledi L, Gulyas G, Jávor A (2013) Investigation of polymorphisms and association of the ABCG2 gene with milk production traits in sheep. Livestock Science 154:64-68 doi:10.1016/j.livsci.2013.03.010

Asfaw MT, Girma A, Ådnøy T, Dagnachew BS, Sundsaasen KK, Lien S, Kent MP, Devold TG, Narvhus J, Vegarud GE (2013) New genetic polymorphism at the αs1-casein gene region in Ethiopian indigenous goat breeds. Small Ruminant Research 113:329-334 doi:10.1016/j.smallrumres.2013.03.012

Belova T, Zhan B, Wright J, Caccamo M, Asp T, Simkova H, Kent MP, Bendixen C, Panitz F, Lien S, Dolezel J, Olsen OA, Sandve SR (2013) Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat. BMC Genomics 14:11 pages doi:10.1186/1471-2164-14-222

Bourret V, Dionne M, Kent MP, Lien S, Bernatchez L (2013) LANDSCAPE GENOMICS IN ATLANTIC SALMON (SALMO SALAR): SEARCHING FOR GENE-ENVIRONMENT INTERACTIONS DRIVING LOCAL ADAPTATION. Evolution 67:3469-3487 doi:10.1111/evo.12139

Bourret V, Kent MP, Primmer CR, Vasimãgi A, Karlsson S, Hindar K, McGinnity P, Verspoor E, Bernatchez L, Lien S (2013) SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar). Molecular Ecology 22:532-551 doi:10.1111/mec.12003

Castro V, Grisdale-Helland B, Helland S, Torgersen J, Kristensen T, Claireaux G, Farrell AP, Takle HR (2013) Cardiac molecular-acclimation mechanisms in response to swimming-induced exercise in atlantic salmon. PLoS ONE 8:e55056 doi:10.1371/journal.pone.0055056

Culling M, Freamo H, Patterson K, Berg PR, Lien S, Boulding EG (2013) Signatures of Selection on Growth, Shape, Parr Marks, and SNPs Among Seven Canadian Atlantic Salmon (Salmo Salar) Populations. Open Evolution Journal 7:16 pages doi:10.2174/1874404401307010001

Drywa A, Pocwierz-Kotus A, Was A, Dobosz S, Kent MP, Lien S, Bernas R, Wenne R (2013) Genotyping of two populations of Southern Baltic Sea trout Salmo trutta m. trutta using an Atlantic salmon derived SNP-array. Marine Genomics 9:25-32 doi:10.1016/j.margen.2012.08.001

Ergon Å, Hamland H, Rognli OA (2013) Differential expression of VRN1 and other MADS-box genes in Festuca pratensis selections with different vernalization requirements. Biologia plantarum 57:245-254 doi:10.1007/s10535-012-0283-z

Gjuvsland AB, Vik JO, Beard D, Hunter PJ, Omholt SW (2013) Bridging the genotypephenotype gap: what does it take?. Journal of Physiology 591:2055-2066 doi:10.1113/jphysiol.2012.248864

Gjuvsland AB, Wang Y, Plahte E, Omholt SW (2013) Monotonicity is a key feature of genotype-phenotype maps. Frontiers in Genetics 4:15 pages doi:10.3389/fgene.2013.00216

Glover K, Pertoldi C, Besnier F, Wennevik V, Kent MP, Skaala Ø (2013) Atlantic salmon populations invaded by farmed escapees: quantifying genetic introgression with a Bayesian approach and SNPs. BMC Genetics 14:19 pages doi:10.1186/1471-2156-14-74

Grammes F, Reveco FEU, Romarheim OH, Landsverk T, Mydland LT, Øverland M (2013) Candida utilis and Chlorella vulgaris Counteract Intestinal Inflammation in Atlantic Salmon (Salmo salar L.). PLoS ONE 8:e83213 doi:10.1371/journal.pone.0083213

Immanen J, Nieminen K, Silva HD, Rojas FR, Meisel LA, Silva H, Albert VA, Hvidsten TR, Helariutta Y (2013) Characterization of cytokinin signaling and homeostasis gene families in two hardwood tree species: Populus trichocarpa and Prunus persica. BMC Genomics 14: doi:10.1186/1471-2164-14-885

Johnsen H, Tveiten H, Torgersen J, Andersen Ø (2013) Divergent and sex-dimorphic expression of the paralogs of the Sox9-Amh-Cyp19a1 regulatory cascade in developing and adult atlantic cod (Gadus morhua L.). Molecular Reproduction and Development 80:358-370 doi:10.1002/mrd.22170

Johnston SE, Lindqvist M, Niemelä E, Orell P, Erkinaro J, Kent MP, Lien S, Vähä JP, Vasemägi A, Primmer CR (2013) Fish scales and SNP chips: SNP genotyping and allele frequency estimation in individual and pooled DNA from historical samples of Atlantic salmon (Salmo salar). BMC Genomics 14:13 pages doi:10.1186/1471-2164-14-439

Kerty E, Heuser K, Indahl UG, Berg PR, Nakken S, Lien S, Omholt SW, Ottersen OP, Nagelhus EA (2013) Is the brain water channel aquaporin-4 a pathogenetic factor in idiopathic intracranial hypertension? Results from a combined clinical and genetic study in a Norwegian cohort. Acta Ophthalmologica 91:88-91 doi:10.1111/j.1755-3768.2011.02231.x

Li C, Rudi H, Stockinger EJ, Cheng H, Cao M, Fox SE, Mockler TC, Westereng B, Fjellheim S, Höglind M, Rognli OA, Sandve SR (2013) Brachypodium distachyon As a Model For Studying Cold Stress Responses In Temperate Grasses. Bioforsk FOKUS 8:15-15 doi:

Miranda H, Cheregi O, Netotea S, Hvidsten TR, Moritz T, Funk C (2013) Co-expression analysis, proteomic and metabolomic study on the impact of a Deg/HtrA protease triple mutant in Synechocystis sp. PCC 6803 exposed to temperature and high light stress. Journal of Proteomics 78:294-311 doi:10.1016/j.jprot.2012.09.036

Nome T, Thomassen GOS, Bruun J, Ahlquist TC, Bakken AC, Hoff AM, Rognum TO, Nesbakken A, Lorenz S, Sun J, Barros-Silva JD, Lind GE, Myklebost O, Teixeira M, Meza-Zepeda LA, Lothe RA, Skotheim RI (2013) Common fusion transcripts identified in colorectal cancer cell lines by high throughput RNA sequencing. Translational Oncology 6:546-553 doi:10.1593/tlo.13457

Nystedt B, Street N, Wetterbom A, Zuccolo A, Lin YC, Scofield DG, Vezzi F, Delhomme N, Giacomello S, Alexeyenko A, Vicedomini R, Sahlin K, Sherwood E, Elfstrand M, Gramzow L, Holmberg K, Hällman J, Keech O, Klasson L, Koriabine M, Kucukoglu M, Käller M, Luthman J, Lysholm F, Niittylä T, Olson Å, Rilakovic N, Ritland C, Rossello JA, Sena J, Svensson T, Talavera-Lopez C, Theissen G, Tuominen H, Vanneste K, Wu ZQ, Zhang B, Zerbe P, Arvestad L, Bhalerao R, Bohlmann J, Bousquet J, Gil RG, Hvidsten TR, de Jong PJ, MacKay J, Morgante M, Ritland K, Sundberg B, Thompson SL, Van de Peer Y, Andersson B, Nilsson O, Ingvarsson PK, Lundeberg J, Jansson S (2013) The Norway spruce genome sequence and conifer genome evolution. Nature 49:579-584 doi:doi:10.1038/nature12211

Ozerov M, Vasemägi A, Wennevik V, Diaz-Fernandez R, Kent MP, Gilbey J, Prusov S, Niemela E, Vähä JP (2013) Finding Markers That Make a Difference: DNA Pooling and SNP-Arrays Identify Population Informative Markers for Genetic Stock Identification. PLoS ONE 8:e82434 doi:10.1371/journal.pone.0082434

Ozerov M, Vasemägi A, Wennevik V, Niemelä E, Prusov S, Kent MP, Vähä JP (2013) Cost-effective genome-wide estimation of allele frequencies from pooled DNA in Atlantic salmon (Salmo salar L.). BMC Genomics 14:9 pages doi:10.1186/1471-2164-14-12

Pedersen S, Berg PR, Culling M, Danzmann RG, Glebe B, Leadbeater S, Lien S, Moen T, Vandersteen W, Boulding EG (2013) Quantitative trait loci for precocious parr maturation, early smoltification, and adult maturation in double-backcrossed trans-Atlantic salmon (Salmo salar). Aquaculture 410-411:164-171 doi:10.1016/j.aquaculture.2013.06.039

Perrier C, Bourret V, Kent MP, Bernatchez L (2013) Parallel and nonparallel genome-wide divergence among replicate population pairs of freshwater and anadromous Atlantic salmon. Molecular Ecology 22:5577-5593 doi:10.1111/mec.12500

Plahte E, Gjuvsland AB, Omholt SW (2013) Propagation of genetic variation in gene regulatory networks. Physica D : Non-linear Phenomena 256-257:7-20 doi:10.1016/j.physd.2013.04.002

Preston JC, Sandve SR (2013) Adaptation to seasonality and the winter freeze. Frontiers in Plant Science 4:167: doi:10.3389/fpls.2013.00167

Skugor A, Slanchev K, Torgersen JS, Tveiten H, Andersen Ø (2013) Conserved Mechanisms for Germ Cell-Specific Localization of nanos3 Transcripts in Teleost Species with Aquaculture Significance. Marine Biotechnology : doi:10.1007/s10126-013-9543-y

Sodeland M, Gaarder M, Moen T, Thomassen MS, Kjøglum S, Kent MP, Lien S (2013) Genome-wide association testing reveals quantitative trait loci for fillet texture and fat content in Atlantic salmon. Aquaculture 408-409:169-174 doi:10.1016/j.aquaculture.2013.05.029

Srivastava V, Obudulu O, Bygdell J, Löfstedt T, Rydén P, Nilsson R, Ahnlund M, Johansson A, Jonsson P, Freyhult E, Qvarnström J, Karlsson J, Melzer M, Moritz T, Trygg J, Hvidsten TR, Wingsle G (2013) OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants. BMC Genomics 14: doi:10.1186/1471-2164-14-893

Tøndel K, Vik JO, Martens H, Indahl UG, Smith N, Omholt SW (2013) Hierarchical multivariate regression-based sensitivity analysis reveals complex parameter interaction patterns in dynamic models. Chemometrics and Intelligent Laboratory Systems 120:25-41 doi:10.1016/j.chemolab.2012.10.006

Vigeland MD, Spannagl M, Asp T, Paina C, Rudi H, Rognli OA, Fjellheim S, Sandve SR (2013) Evidence for adaptive evolution of low-temperature stress response genes in a Pooideae grass ancestor. New Phytologist 199:1060-1068 doi:10.1111/nph.12337

Våge DI, Husdal M, Kent MP, Klemetsdal G, Boman IA (2013) A missense mutation in growth differentiation factor 9 (GDF9) is strongly associated with litter size in sheep. BMC Genetics 14:8 pages doi:10.1186/1471-2156-14-1

Wang Y, Vik JO, Omholt SW, Gjuvsland AB (2013) Effect of regulatory architecture on broad versus narrow sense heritability. PloS Computational Biology 9:e1003053 doi:10.1371/journal.pcbi.1003053

Ytteborg E, Torgersen J, Pedersen ME, Helland S, Grisdale-Helland B, Takle HR (2013) Exercise induced mechano-sensing and Substance P mediated bone modeling in Atlantic salmon. Bone 53:259-268 doi:10.1016/j.bone.2012.11.025

Zörgö EB, Chwialkowska K, Gjuvsland AB, Garre E, Sunnerhagen P, Liti G, Blomberg A, Omholt SW, Warringer J (2013) Ancient Evolutionary Trade-Offs between Yeast Ploidy States. PLoS Genetics 9:e1003388 doi:10.1371/journal.pgen.1003388

Brenna-Hansen S, Li J, Kent MP, Boulding EG, Dominik S, Davidson WS, Lien S (2012) Chromosomal differences between European and North American Atlantic salmon discovered by linkage mapping and supported by fluorescence in situ hybridization analysis. BMC Genomics 13:432 doi:10.1186/1471-2164-13-432

Egeland T, Fonneløp AE, Berg PR, Kent MP, Lien S (2012) Complex mixtures: A critical examination of a paper by Homer et al. Forensic Science International 6:64-69 doi:10.1016/j.fsigen.2011.02.003

Grammes F, Rørvik KA, Takle HR (2012) Tetradecylthioacetic acid modulates cardiac transcription in Atlantic salmon, Salmo salar L., suffering heart and skeletal muscle inflammation. Journal of Fish Diseases 35:109-117 doi:10.1111/j.1365-2761.2011.01326.x

Grammes F, Rørvik KA, Thomassen MS, Berge RK, Takle HR (2012) Genome wide response to dietary tetradecylthioacetic acid supplementation in the heart of Atlantic Salmon (Salmo salar L). BMC Genomics 13:13 pages doi:10.1186/1471-2164-13-180

Gutierrez A, Lubieniecki K, Davidson EA, Lien S, Kent MP, Fukui S, Withler RE, Swift B, Davidson WS (2012) Genetic mapping of quantitative trait loci (QTL) for body-weight in Atlantic salmon (Salmo salar) using a 6.5 K SNP array. Aquaculture 358-359:61-70 doi:10.1016/j.aquaculture.2012.06.017

Karlengen IJ, Harstad OM, Taugbøl O, Berget I, Aastveit AH, Våge DI (2012) The effect of excess cobalt on milk fatty acid profiles and transcriptional regulation of SCD, FASN, DGAT1 and DGAT2 in the mammary gland of lactating dairy cows. Journal of animal physiology and animal nutrition (1986) 96:1065-1073 doi:10.1111/j.1439-0396.2011.01221.x

Lewandowska-Sabat A, Fjellheim S, Rognli OA (2012) The continental-oceanic climatic gradient impose clinal variation in vernalization response in Arabidopsis thaliana. Environmental and Experimental Botany 78:109-116 doi:10.1016/j.envexpbot.2011.12.033

Lewandowska-Sabat A, Winge P, Fjellheim S, Dørum G, Bones AM, Rognli OA (2012) Genome wide transcriptional profiling of acclimation to photoperiod in high-latitude accessions of Arabidopsis thaliana. Plant Science 185-186:143-155 doi:10.1016/j.plantsci.2011.10.009

Li C, Rudi H, Stockinger EJ, Cheng H, Cao M, Fox SE, Mockler TC, Westereng B, Fjellheim S, Rognli OA, Sandve SR (2012) Comparative analyses reveal potential uses of Brachypodium distachyon as a model for cold stress responses in temperate grasses. BMC Plant Biology 12:15 pages doi:10.1186/1471-2229-12-65

Nyquist KB, Panagopoulos I, Thorsen J, Haugom L, Gorunova L, Bjerkehagen B, Fosså A, Guriby M, Nome T, Lothe RA, Skotheim RI, Heim S, Micci F (2012) Whole-Transcriptome Sequencing Identifies Novel IRF2BP2-CDX1 Fusion Gene Brought about by Translocation t(1;5)(q42;q32) in Mesenchymal Chondrosarcoma. PLoS ONE 7:7 pages doi:10.1371/journal.pone.0049705

Skotheim RI, Nome T, Thomassen GOS, Johannessen B, Bakken AC, Bruun J, Ahlquist TC, Meza-Zepeda LA, Myklebost O, Lothe RA (2012) Identification of Fusion Transcripts in Colorectal Cancer by Combined RNA-seq and Exon Microarray Analyses. European Journal of Cancer 48:S121-S121 doi:

Thingnes J, Lavelle TJ, Gjuvsland AB, Omholt SW, Hovig E (2012) Towards a quantitative understanding of the MITF-PIAS3-STAT3 connection. BMC Systems Biology 6:19 pages doi:10.1186/1752-0509-6-11

Tøndel K, Indahl UG, Gjuvsland AB, Omholt SW, Martens H (2012) Multi-way metamodelling facilitates insight into the complex input-output maps of nonlinear dynamic models. BMC Systems Biology 6:88 doi:10.1186/1752-0509-6-88

Vik JO, Gjuvsland AB, Omholt SW (2012) From sequence to consequence. META :19-25 doi:

Wang Y, Gjuvsland AB, Vik JO, Smith NP, Hunter PJ, Omholt SW (2012) Parameters in Dynamic Models of Complex Traits are Containers of Missing Heritability. PloS Computational Biology 8:e1002459 doi:10.1371/journal.pcbi.1002459

Westengen OT, Berg PR, Kent MP, Brysting AK (2012) Spatial Structure and Climatic Adaptation in African Maize Revealed by Surveying SNP Diversity in Relation to Global Breeding and Landrace Panels. PLoS ONE 7:e47832 doi:10.1371/journal.pone.0047832

Ytteborg E, Torgersen J, Bæverfjord G, Takle HR (2012) Four stages characterizing vertebral fusions in Atlantic salmon. Journal of Applied Ichthyology 28:453-459 doi:10.1111/j.1439-0426.2012.01984.x

Zörgö EB, Gjuvsland AB, Cubillos FA, Louis EJ, Liti G, Blomberg A, Omholt SW, Warringer J (2012) Life History Shapes Trait Heredity by Accumulation of Loss-of-Function Alleles in Yeast. Molecular biology and evolution 29:1781-1789 doi:10.1093/molbev/mss019

Bakkemo KR, Mikkelsen H, Bordevik M, Torgersen J, Winther-Larsen HC, Vanberg C, Olsen r, Johansen LH, Seppola MK (2011) Intracellular localisation and innate immune responses following Francisella noatunensis infection of Atlantic cod (Gadus morhua) macrophages. Fish and Shellfish Immunology 31:993-1004 doi:10.1016/j.fsi.2011.08.020

Bartoš J, Sandve SR, Kölliker R, Kopecký D, Christelová P, Stočes Š, Østrem L, Larsen A, Kilian A, Rognli OA, Doležel J (2011) Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis. Theoretical and Applied Genetics 122:1133-1147 doi:10.1007/s00122-010-1518-z

Boman IA, Klemetsdal G, Nafstad O, Blichfeldt T, Våge DI (2011) Selection based on progeny testing induces rapid changes in myostatin allele frequencies – a case study in sheep. Journal of Animal Breeding and Genetics 128:52-55 doi:10.1111/j.1439-0388.2010.00879.x

Dagnachew BS, Thaller G, Lien S, Ådnøy T (2011) Casein SNP in Norwegian goats: additive and dominance effects on milk composition and quality. Genetics Selection Evolution 43:12 pages doi:10.1186/1297-9686-43-31

Elameen A, Larsen A, Klemsdal S, Fjellheim S, Sundheim L, Msolla S, Masumba E, Rognli OA (2011) Phenotypic diversity of plant morphological and root descriptor traits within a sweet potato, Ipomoea batatas (L.) Lam., germplasm collection from Tanzania. Genetic Resources and Crop Evolution 58:397-407 doi:10.1007/s10722-010-9585-1

Elvenes J, Thomassen EI, Johnsen SS, Kaino K, Sjøttem E, Johansen T (2011) Pax6 Represses Androgen Receptor-Mediated Transactivation by Inhibiting Recruitment of the Coactivator SPBP. PLoS ONE 6:12 pages doi:10.1371/journal.pone.0024659

Fiil A, Jensen LB, Fjellheim S, Lübberstedt T, Andersen JR (2011) Variation in the Vernalization Response of a Geographically Diverse Collection of Timothy Genotypes. Crop science 51:2689-2697 doi:10.2135/cropsci2010.12.0677

Freamo H, O’Reilly P, Berg PR, Lien S, Boulding EG (2011) Outlier SNPs show more genetic structure between two Bay of Fundy metapopulations of Atlantic salmon than do neutral SNPs. Molecular Ecology Resources 11:254-267 doi:10.1111/j.1755-0998.2010.02952.x

Gidskehaug LH, Kent MP, Hayes BJ, Lien S (2011) Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array. Bioinformatics 27:303-310 doi:10.1093/bioinformatics/btq673

Gjuvsland AB, Vik JO, Woolliams JA, Omholt SW (2011) Order-preserving principles underlying genotype-phenotype maps ensure high additive proportions of genetic variance. Journal of Evolutionary Biology 24:2269-2279 doi:10.1111/j.1420-9101.2011.02358.x

Grammes F, Takle HR (2011) Anti-inflammatory effects of tetradecylthioacetic acid (TTA) in macrophage-like cells from Atlantic salmon (Salmo salar L.). BMC Immunology 12:13 pages doi:10.1186/1471-2172-12-41

Grindflek E, Lien S, Hamland H, Hansen MHS, Kent MP, van Son M, Meuwissen T (2011) Large scale genome-wide association and LDLA mapping study identifies QTLs for boar taint and related sex steroids. BMC Genomics 12:16 pages doi:10.1186/1471-2164-12-362

Grindflek E, Meuwissen T, Aasmundstad T, Hamland H, Hansen MHS, Nome T, Kent MP, Torjesen PA, Lien S (2011) Revealing genetic relationships between compounds affecting boar taint and reproduction in pigs. Journal of Animal Science 89:680-692 doi:10.2527/jas.2010-3290

Junge C, Vøllestad LA, Barson NJ, Haugen T, Villar JO, Sætre GP, Leder EH, Primmer CR (2011) Strong gene flow and lack of stable population structure in the face of rapid adaptation to local temperature in a spring-spawning salmonid, the European grayling (Thymallus thymallus). Heredity 106:460-471 doi:10.1038/hdy.2010.160

Karlsson S, Moen T, Lien S, Glover KA, Hindar K (2011) Generic genetic differences between farmed and wild Atlantic salmon identified from a 7K SNP-chip. Molecular Ecology Resources 11:247-253 doi:10.1111/j.1755-0998.2010.02959.x

Krasnov A, Timmerhaus G, Schiøtz BL, Torgersen J, Afanasyev S, Iliev DB, Jørgensen JB, Takle HR, Jørgensen SM (2011) Genomic survey of early responses to viruses in Atlantic salmon, Salmo salar L. Molecular Immunology 49:163-174 doi:10.1016/j.molimm.2011.08.007

Lien S, Gidskehaug LH, Moen T, Hayes BJ, Berg PR, Davidson WS, Omholt SW, Kent MP (2011) A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns. BMC Genomics 12:10 pages doi:10.1186/1471-2164-12-615

Olsen HG, Hayes BJ, Kent MP, Nome T, Svendsen M, Larsgaard AG, Lien S (2011) Genome-wide association mapping in Norwegian Red cattle identifies quantitative trait loci for fertility and milk production on BTA12. Animal Genetics 42:466-474 doi:10.1111/j.1365-2052.2011.02179.x

Rasmussen A, Wyller JA, Vik JO (2011) Relaxation oscillations in spruce–budworm interactions. Nonlinear Analysis: Real world applications 12:304-319 doi:10.1016/j.nonrwa.2010.06.017

Rudi H, Sandve SR, Opseth LM, Larsen A, Rognli OA (2011) Identification of candidate genes important for frost tolerance in Festuca pratensis Huds. by transcriptional profiling. Plant Science 180:78-85 doi:10.1016/j.plantsci.2010.07.014

Sandve SR (2011) Med på veien mot et sekvensert hvetegenom. NBS-nytt 5:6-8 doi:

Sandve SR, Kosmala A, Rudi H, Fjellheim S, Rapacz M, Yamada T, Rognli OA (2011) Molecular mechanisms underlying frost tolerance in perennial grasses adapted to cold climates. Plant Science 180:69-77 doi:10.1016/j.plantsci.2010.07.011

Sodeland M, Grove H, Kent MP, Taylor S, Svendsen M, Hayes BJ, Lien S (2011) Molecular characterization of a long range haplotype affecting protein yield and mastitis susceptibility in Norwegian Red cattle. BMC Genetics 12:10 pages doi:10.1186/1471-2156-12-70

Sodeland M, Kent MP, Hayes BJ, Grove H, Lien S (2011) Recent and historical recombination in the admixed Norwegian Red cattle breed. BMC Genomics 12:24 pages doi:10.1186/1471-2164-12-33

Sodeland M, Kent MP, Olsen HG, Opsal MA, Svendsen M, Sehested E, Hayes BJ, Lien S (2011) Quantitative trait loci for clinical mastitis on chromosomes 2, 6, 14 and 20 in Norwegian Red cattle. Animal Genetics 42:457-465 doi:10.1111/j.1365-2052.2010.02165.x

Star B, Nederbragt AJ, Jentoft S, Grimholt U, Malmstrøm M, Gregers TF, Rounge TB, Paulsen J, Solbakken MH, Sharma A, Wetten OF, Lanzén A, Winer R, Knight J, Vogel JH, Aken B, Andersen Ø, Lagesen K, Tooming-Klunderud A, Edvardsen R, Kirubakaran GT, Espelund M, Nepal C, Previti AC, Karlsen BO, Moum T, Skage M, Berg PR, Gjøen T, Kuhl H, Thorsen J, Malde K, Reinhardt R, Du L, Johansen SD, Searle S, Lien S, Nilsen F, Jonassen I, Omholt SW, Stenseth NC, Jakobsen KS (2011) The genome sequence of Atlantic cod reveals a unique immune system. Nature 477:207-210 doi:10.1038/nature10342

Sundvold H, Helgeland H, Baranski M, Omholt SW, Våge DI (2011) Characterisation of a novel paralog of scavenger receptor class B member I (SCARB1) in Atlantic salmon (Salmo salar). BMC Genetics 12:11 pages doi:10.1186/1471-2156-12-52

Sánchez-Gurmaches J, Østbye TKK, Navarro I, Torgersen J, Hevrøy EM, Ruyter B, Torstensen BE (2011) In vivo and in vitro insulin and fasting control of the transmembrane fatty acid transport proteins in Atlantic salmon (Salmo salar). American Journal of Physiology. Regulatory Integrative and Comparative Physiology 301:R947-R957 doi:10.1152/ajpregu.00289.2011

Torgersen J, Takle HR, Andersen Ø (2011) Differential spatial expression of mef2 paralogs during cardiac development in Atlantic cod (Gadus morhua). Comparative Biochemistry and Physiology – Part B: Biochemistry & Molecular Biology 158:181-187 doi:10.1016/j.cbpb.2010.11.006

Tøndel K, Indahl UG, Gjuvsland AB, Vik JO, Hunter PJ, Omholt SW, Martens H (2011) Hierarchical Cluster-based Partial Least Squares Regression (HC-PLSR) is an efficient tool for metamodelling of nonlinear dynamic models. BMC Systems Biology 5:17 pages doi:10.1186/1752-0509-5-90

Vik JO, Gjuvsland AB, Li L, Tøndel K, Niederer SA, Smith NP, Hunter PJ, Omholt SW (2011) Genotype-phenotype map characteristics of an in silico heart cell. Frontiers in Physiology 2:12 pages doi:10.3389/fphys.2011.00106

Warringer J, Zörgö EB, Cubillos FA, Zia A, Gjuvsland AB, Simpson JT, Forsmark A, Durbin R, Omholt SW, Louis EJ, Liti G, Moses A, Blomberg A (2011) Trait Variation in Yeast Is Defined by Population History. PLoS Genetics 7:e1002111 doi:10.1371/journal.pgen.1002111

Afseth NK, Martens H, Randby ÅT, Gidskehaug LH, Narum B, Jørgensen K, Lien S, Kohler A (2010) Predicting the Fatty Acid Composition of Milk: A Comparison of Two Fourier Transform Infrared Sampling Techniques. Applied Spectroscopy 64:700-707 doi:

Baranski M, Moen T, Våge DI (2010) Mapping of quantitative trait loci for flesh colour and growth traits in Atlantic salmon (Salmo salar). Genetics Selection Evolution 42:14 pages doi:10.1186/1297-9686-42-17

Berget I, Martens H, Kohler A, Sjurseth SK, Afseth NK, Narum B, Ådnøy T, Lien S (2010) Caprine CSN1S1 haplotype effect on gene expression and milk composition measured by Fourier transform infrared spectroscopy. Journal of Dairy Science 93:4340-4350 doi:10.3168/jds.2009-2854

Boman IA, Klemetsdal G, Nafstad O, Blichfeldt T, Våge DI (2010) Impact of two myostatin (MSTN) mutations on weight gain and lamb carcass classification in Norwegian White Sheep (Ovis aries). Genetics Selection Evolution 42:7 pages doi:10.1186/1297-9686-42-4

Davidson WS, Koop BF, Jones SJ, Vidal R, Iturra P, Maass A, Jonassen I, Lien S, Omholt SW (2010) Sequencing the genome of the Atlantic salmon (Salmo salar). Genome Biology 11:7 pages doi:10.1186/gb-2010-11-9-403

Dominik S, Henshall J, Kube PD, King H, Lien S, Kent MP, Elliott NG (2010) Evaluation of an Atlantic salmon SNP chip as a genomic tool for the application in a Tasmanian Atlantic salmon (Salmo salar) breeding population. Aquaculture 308:S56-S61 doi:10.1016/j.aquaculture.2010.05.038

Gjuvsland AB, Plahte E, Ådnøy T, Omholt SW (2010) Allele Interaction – Single Locus Genetics Meets Regulatory Biology. PLoS ONE 5:e9379 doi:10.1371/journal.pone.0009379

Glover K, Hansen MM, Lien S, Als TD, Høyheim B, Skaala Ø (2010) A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment. BMC Genetics 11:1 pages doi:10.1186/1471-2156-11-2

Grindflek E, Berget I, Moe M, Oeth P, Lien S (2010) Transcript profiling of candidate genes in testis of pigs exhibiting large differences in androstenone levels. BMC Genetics 11:11 pages doi:10.1186/1471-2156-11-4

Heuser K, Hoddevik EH, Taubøll E, Gjerstad L, Indahl UG, Kaczmarek L, Berg PR, Lien S, Nagelhus EA, Ottersen OP (2010) Temporal Lobe Epilepsy and Matrix Metalloproteinase 9: A tempting relation but negative genetic association. Seizure 19:335-338 doi:10.1016/j.seizure.2010.05.003

Heuser K, Nagelhus EA, Taubøll E, Indahl UG, Berg PR, Lien S, Nakken S, Gjerstad L, Ottersen OP (2010) Variants of the genes encoding AQP4 and Kir4.1 are associated with subgroups of patients with temporal lobe epilepsy. Epilepsy Research 88:55-64 doi:10.1016/j.eplepsyres.2009.09.023

Johnsen H, Seppola MK, Torgersen J, Delghandi M, Andersen Ø (2010) Sexually dimorphic expression of dmrt1 in immature and mature Atlantic cod (Gadus morhua L.). Comparative Biochemistry and Physiology – Part B: Biochemistry & Molecular Biology 156:197-205 doi:10.1016/j.cbpb.2010.03.009

Karlsson S, Moen T, Hindar K (2010) Contrasting patterns of gene diversity between microsatellites and mitochondrial SNPs in farm and wild Atlantic salmon. Conservation Genetics 11:571-582 doi:10.1007/s10592-009-0034-7

Karlsson S, Moen T, Hindar K (2010) An extended panel of single nucleotide polymorphisms in Atlantic salmon (Salmo salar L.) mitochondrial DNA. Conservation Genetics 11:1171-1175 doi:10.1007/s10592-009-9910-4

Kjos M, Fjellheim S, Rognli OA, Hvoslef-Eide AK (2010) Amplified fragment length polymorphism (AFLP) markers for fingerprinting of Argyranthemum frutescens cultivars. Scientia Horticulturae 124:506-510 doi:10.1016/j.scienta.2010.01.023

Lewandowska-Sabat A, Fjellheim S, Rognli OA (2010) Extremely low genetic variability and highly structured local populations of Arabidopsis thaliana at higher latitudes. Molecular Ecology 19:4753-4764 doi:10.1111/j.1365-294X.2010.04840.x

Lorenz S, Brenna-Hansen S, Moen T, Roseth A, Davidson WS, Omholt SW, Lien S (2010) BAC-based upgrading and physical integration of a genetic SNP map in Atlantic salmon. Animal Genetics 41:48-54 doi:10.1111/j.1365-2052.2009.01963.x

Nourizadeh-Lillabadi R, Torgersen J, Vestrheim O, Kønig M, Aleström P, Syed M (2010) Early Embryonic Gene Expression Profiling of Zebrafish Prion Protein (Prp2) Morphants. PLoS ONE 5:e13573 doi:10.1371/journal.pone.0013573

Oehme MM, Grammes F, Takle HR, Zambonino-Infante JL, Refstie S, Thomassen MS, Rørvik KA, Terjesen BF (2010) Dietary supplementation of glutamate and arginine to Atlantic salmon (Salmo salar L.) increases growth during the first autumn in sea. Aquaculture 310:156-163 doi:10.1016/j.aquaculture.2010.09.043

Olsen HG, Hayes BJ, Kent MP, Nome T, Svendsen M, Lien S (2010) A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattle. Animal Genetics 41:273-280 doi:10.1111/j.1365-2052.2009.01998.x

Salte R, Bentsen H, Moen T, Tripathy S, Bakke TA, Ødegård J, Omholt SW, Hansen LP (2010) Prospects for a genetic management strategy to control Gyrodactylus salaris infection in wild Atlantic salmon (Salmo salar) stocks. Canadian Journal of Fisheries and Aquatic Sciences 67:121-129 doi:10.1139/F09-168

Sandve SR, Fjellheim S (2010) Did gene family expansions during the Eocene-Oligocene boundary climate cooling play a role in Pooideae adaptation to cool climates?. Molecular Ecology 19:2075-2088 doi:10.1111/j.1365-294X.2010.04629.x

Sandve SR, Rudi H, Dørum G, Berg PR, Rognli OA (2010) High-throughput genotyping of unknown genomic terrain in complex plant genomes: lessons from a case study. Molecular breeding 26:711-718 doi:10.1007/s11032-010-9479-0

Skinnes H, Semagn K, Tarkegne Y, Marøy AG, Bjørnstad Å (2010) The inheritance of anther extrusion in hexaploid wheat and its relationship to Fusarium head blight resistance and deoxynivalenol content. Plant Breeding 129:149-155 doi:10.1111/j.1439-0523.2009.01731.x

Skugor S, Skugor A, Todorcevic M, Torgersen J, Ruyter B, Krasnov A (2010) Exposure to lipopolysaccharide induces immune genes in cultured preadipocytes of Atlantic salmon. Fish and Shellfish Immunology 29:817-824 doi:10.1016/j.fsi.2010.07.026

Solaas K, Legry V, Retterstøl K, Berg PR, Holven KB, Ferrieres J, Amouyel P, Lien S, Romeo J, Valtuena J, Widhalm K, Ruiz J, Dallongeville J, Tonstad S, Rootwelt H, Halvorsen B, Nenseter MS, Birkeland KI, Thorsby PM, Meirhaeghe A, Nebb HI (2010) Suggestive evidence of associations between liver X receptor beta polymorphisms with type 2 diabetes mellitus and obesity in three cohort studies: HUNT2 (Norway), MONICA (France) and HELENA (Europe). BMC Medical Genetics 11:11 pages doi:10.1186/1471-2350-11-144

Songe-Møller L, Van den Born E, Leihne V, Vågbø CB, Kristoffersen T, Krokan HE, Kirpekar F, Falnes P, Klungland A (2010) Mammalian ALKBH8 Possesses tRNA Methyltransferase Activity Required for the Biogenesis of Multiple Wobble Uridine Modifications Implicated in Translational Decoding. Molecular and Cellular Biology 30:1814-1827 doi:10.1128/MCB.01602-09

Sundvold H, Ruyter B, Østbye TKK, Moen T (2010) Identification of a novel allele of peroxisome proliferator-activated receptor gamma (PPARG) and its association with resistance to Aeromonas salmonicida in Atlantic salmon (Salmo salar). Fish and Shellfish Immunology 28:394-400 doi:10.1016/j.fsi.2009.11.023

Tøndel K, Gjuvsland AB, Måge I, Martens H (2010) Screening design for computer experiments: metamodelling of a deterministic mathematical model of the mammalian circadian clock. Journal of Chemometrics 24:738-747 doi:10.1002/cem.1363

Våge DI, Boman IA (2010) A nonsense mutation in the beta-carotene oxygenase 2 (BCO2) gene is tightly associated with accumulation of carotenoids in adipose tissue in sheep (Ovis aries). BMC Genetics 11:6 pages doi:10.1186/1471-2156-11-10

Ytteborg E, Bæverfjord G, Hjelde K, Torgersen J, Takle HR (2010) Molecular pathology of vertebral deformities in hyperthermic Atlantic salmon (Salmo salar). BMC Physiology 10:16- doi:

Ytteborg E, Torgersen J, Bæverfjord G, Takle HR (2010) Morphological and molecular characterization of developing vertebral fusions using a teleost model. BMC Physiology 10:15 pages doi:

Ytteborg E, Torgersen J, Pedersen ME, Bæverfjord G, Hannesson KO, Takle HR (2010) Remodeling of the notochord during development of vertebral fusions in Atlantic salmon (Salmo salar). Cell and Tissue Research 342:363-376 doi:10.1007/s00441-010-1069-2

Alne H, Takle HR, Terjesen BF, Thomassen MS, Grammes F, Oehme MM, Refstie S, Sigholt T, Berge RK, Rørvik KA (2009) Increased survival by feeding tetradecylthioacetic acid during a natural outbreak of heart and skeletal muscle inflammation in S0 Atlantic salmon, Salmo salar L. Journal of Fish Diseases 32:953-961 doi:

Alne H, Thomassen MS, Takle HR, Terjesen BF, Grammes F, Oehme MM, Refstie S, Sigholt T, Berge RK, Rørvik KA (2009) Increased survival by feeding tetradecylthioacetic acid during a natural outbreak of heart and skeletal muscle inflammation in S0 Atlantic salmon, Salmo salar L. Journal of Fish Diseases 32:953-961 doi:10.1111/j.1365-2761.2009.01078.x

Andersen Ø, Torgersen JS, Pagander H, Magnesen T, Johnston IA (2009) Gene expression analyses of essential catch factors in the smooth and striated adductor muscles of larval, juvenile and adult great scallop (Pecten maximus). Journal of Muscle Research and Cell Motility 30:233-242 doi:

Andersen Ø, Torgersen JS, Pagander HH, Magnesen T, Johnston IA (2009) Gene expression analysis of essential catch factors in the smooth and striated adductor muscles of larval, juvenile and adult great scallop (Pecten maximus). Journal of Muscle Research and Cell Motility 30:233-242 doi:10.1007/s10974-009-9192-y

Arnyasi M, Komlosi I, Lien S, Czegledi L, Nagy S, Javor A (2009) Searching for DNA markers for milk production and composition on chromosome 6 in sheep. Journal of Animal Breeding and Genetics 126:142-147 doi:10.1111/j.1439-0388.2008.00764.x

Barson NJ, Cable J, van Oosterhout C (2009) Population genetic analysis of microsatellite variation of guppies (Poecilia reticulata) in Trinidad and Tobago: evidence for a dynamic source-sink metapopulation structure, founder events and population bottlenecks. Journal of Evolutionary Biology 22:485-497 doi:10.1111/j.1420-9101.2008.01675.x

Barson NJ, Haugen T, Vøllestad LA, Primmer CR (2009) Contemporary isolation-by-distance, but not isolation-by-time, among demes of european grayling (Thymallus thymallus, Linnaeus) with recent common ancestors. Evolution 63:549-556 doi:10.1111/j.1558-5646.2008.00554.x

Boman IA, Klemetsdal G, Blichfeldt T, Nafstad O, Våge DI (2009) A frameshift mutation in the coding region of the myostatin gene (MSTN) affects carcass conformation and fatness in Norwegian White Sheep (Ovis aries). Animal Genetics 40:418-422 doi:10.1111/j.1365-2052.2009.01855.x

Boman IA, Våge DI (2009) An insertion in the coding region of the myostatin (MSTN) gene affects carcass conformation and fatness in the Norwegian Spælsau (Ovis aries). BMC Research Notes 2:1-5 doi:

Fjellheim S, Jørgensen MH, Kjos M, Borgen L (2009) A molecular study of hybridization and homoploid hybrid speciation in Argyranthemum (Asteraceae) on Tenerife, the Canary Islands. Botanical journal of the Linnean Society 159:19-31 doi:10.1111/j.1095-8339.2008.00947.x

Fjellheim S, Pasakinskiene I, Grønnerød S, Paplauskiene V, Rognli OA (2009) Genetic Structure of Local Populations and Cultivars of Meadow Fescue from the Nordic and Baltic Regions. Crop science 49:200-210 doi:10.2135/cropsci2007.08.0422

Gibbs RA, Taylor J, van Tassell C, Barendse W, Eversoie KA, Gill CA, Green R, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan J, Nazareth LV, Schnabel RD, Weinstock G, Wheeler DA, Ajmone-Marsan P, Boettcher P, Caetano A, Garcia J, Hanotte O, Mariani P, Skow L, Williams J, Diallo B (2009) Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds. Science 324:528-532 doi:10.1126/science.1167936

Godvik IMR, Loe LE, Vik JO, Veiberg V, Langvatn R, Mysterud A (2009) Temporal scales, trade-offs, and functional responses in red deer habitat selection. Ecology 90:699-710 doi:10.1890/08-0576.1

Hvidsten T, Lægreid A, Kryshtafovych A, Andersson G, Fidelis K, Komorowski J (2009) A comprehensive analysis of the structure-function relationship in proteins based on local structure similarity. PLoS ONE 4:e6266- doi:10.1371/journal.pone.0006266

Lien S, Olsaker I, Kent MP, Elsik CG, Worley KC, Tellam RL, Gibbs RA, Muzny DM, Weinstock G, Adelson D, Eichler E, Hamernik DL, Kappes SM, Lewin HA, Nicholas FW, Reymond A, Skow L, Zdobnov E, Anzola J, Gerlach D, Edgar RC, McEwan J, Raison J, Chrast J, Eyras E, Henrichsen C, Plass M, Junier T, Donthu R, Larkin D (2009) The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution. Science 324:522-528 doi:

Liu Y, Qin X, Song XZH, Jiang H, Shen Y, Durbin KJ, Lien S, Kent MP, Sodeland M, Ren Y, Zhang L, Sødergren E, Havlak P, Worley KC, Weinstock G, Gibbs RA (2009) Bos taurus genome assembly. BMC Genomics 10:1 pages doi:10.1186/1471-2164-10-180

Luan T, Woolliams JA, Lien S, Kent MP, Svendsen M, Meuwissen T (2009) The Accuracy of Genomic Selection in Norwegian Red Cattle Assessed by Cross-Validation. Genetics 183:1119-1126 doi:10.1534/genetics.109.107391

Moe M, Lien S, Aasmundstad T, Meuwissen T, Hansen MHS, Bendixen C, Grindflek E (2009) Association between SNPs within candidate genes and compounds related to boar taint and reproduction. BMC Genetics 10:32: doi:10.1186/1471-2156-10-32

Moen T, Baranski M, Sonesson AK, Kjøglum S (2009) Confirmation and fine-mapping of a major QTL for resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar): population-level associations between markers and trait. BMC Genomics 10:14 pages doi:10.1186/1471-2164-10-368

Moen T, Delghandi M, Wesmajervi MS, Fjalestad KT, Westgaard JI (2009) A SNP/microsatellite genetic linkage map of the Atlantic cod (Gadus morhua). Animal Genetics 40:993-996 doi:10.1111/j.1365-2052.2009.01938.x

Nielsen E, Hemmer-Hansen J, Poulsen NA, Loeschcke V, Moen T, Johansen T, Mittelholzer C, Taranger GL, Ogden R, Carvalho GR (2009) Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua). BMC Evolutionary Biology 9:11 pages doi:10.1186/1471-2148-9-276

Nilsen H, Olsen HG, Hayes BJ, Nome T, Sehested E, Svendsen M, Meuwissen T, Lien S (2009) Characterization of a QTL region affecting clinical mastitis and protein yield on BTA6. Animal Genetics 40:701-712 doi:10.1111/j.1365-2052.2009.01908.x

Nilsen H, Olsen HG, Hayes BJ, Sehested E, Svendsen M, Nome T, Meuwissen T, Lien S (2009) Casein haplotypes and their association with milk production traits in Norwegian Red cattle. Genetics Selection Evolution 41:12- doi:10.1186/1297-9686-41-24

Sacks BN, Våge DI, Statham MJ (2009) A medium-throughput SNP assay for detecting genetic variation in coding and non-coding portions of the red fox genome. Conservation Genetics Resources 1:459-463 doi:

Samulin-Erdem JM, Berg PR, Sundvold H, Grindflek E, Lien S (2009) Expression of DLK1 splice variants during porcine adipocyte development in vitro and in vivo. Animal Genetics 40:239-241 doi:10.1111/j.1365-2052.2008.01812.x

Samulin-Erdem JM, Berget I, Grindflek E, Lien S, Sundvold H (2009) Changes in lipid metabolism associated gene transcripts during porcine adipogenesis. Comparative Biochemistry and Physiology – Part B: Biochemistry & Molecular Biology 153:8-17 doi:10.1016/j.cbpb.2008.12.019

Solaas K, Legry V, Holven K, Retterstøl K, Thorsby PM, Ferrieres J, Tonstad S, Rootwelt H, Lien S, Halvorsen BL, Nenseter M, Amouyel P, Birkeland KI, Meirhaeghe A, Nebb H (2009) Association study between LXR beta polymorphisms and type 2 diabetes mellitus. Diabetologia :138- doi:

Torgersen J, Takle HR, Andersen Ø (2009) Localization of mRNAs and Proteins in Methyl Methacrylate-embedded Tissues. Journal of Histochemistry and Cytochemistry 57:825-830 doi:10.1369/jhc.2009.953695

Wabnik K, Hvidsten T, Kedzierska A, Van Leene J, De Jaeger G, Beemster G, Komorowski J, Kuiper M (2009) Gene expression trends and protein features effectively complement each other in gene function prediction. Bioinformatics 25:322-330 doi:10.1093/bioinformatics/btn625

Ytteborg E, Bæverfjord G, Hjelde K, Torgersen J, Takle HR (2009) Temperature affects the expression of genes involved in the mineralization process of the spinal column in Atlantic salmon (Salmo salar). Bone 44:S341-S342 doi:10.1016/j.bone.2009.03.145

Boulding E, Culling M, Glebe B, Berg PR, Lien S, Moen T (2008) Conservation genomics of Atlantic salmon: SNPs associated with QTLs for adaptive traits in parr from four trans-Atlantic backcrosses. Heredity 101:381-391 doi:10.1038/hdy.2008.67

Cazelles B, Chavez M, Berteaux D, Menard F, Vik JO, Jenouvrier S, Stenseth NC (2008) Wavelet analysis of ecological time series. Oecologia 156:287-304 doi:10.1007/s00442-008-0993-2

Charlier C, Coppieters W, Rollin F, Desmecht D, Agerholm JS, Cambisano N, Carta E, Dardano S, Dive M, Fasquelle C, Frennet JC, Hanset R, Hubin X, Jorgensen C, Karim L, Kent MP, Harvey K, Pearce BR, Simon P, Tama N, Nie H, Vandeputte S, Lien S, Longeri M, Fredholm M, Harvey RJ, Georges M (2008) Highly effective SNP-based association mapping and management of recessive defects in livestock. Nature Genetics 40:449-454 doi:10.1038/ng.96

Danzmann RG, Davidson EA, Ferguson MM, Gharbi K, Koop BF, Høyheim B, Lien S, Lubieniecki K, Moghadam HK, Park J, Phillips R, Davidson WS (2008) Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon). BMC Genomics 9:557- doi:

Elameen A, Fjellheim S, Larsen A, Rognli OA, Sundheim L, Msolla S, Masumba E, Mtunda K, Klemsdal S (2008) Analysis of genetic diversity in a sweet potato (Ipomoea batatas L.) germplasm collection from Tanzania as revealed by AFLP. Genetic Resources and Crop Evolution 55:397-408 doi:10.1007/s10722-007-9247-0

Elameen A, Klemsdal S, Dragland S, Fjellheim S, Rognli OA (2008) Genetic diversity in a germplasm collection of roseroot (Rhodiola rosea) in Norway studied by AFLP. Biochemical Systematics and Ecology 36:706-715 doi:10.1016/j.bse.2008.07.009

Hayes BJ, Lien S, Nilsen H, Olsen HG, Berg PR, Maceachern S, Potter S, Meuwissen T (2008) The origin of selection signatures on bovine chromosome 6. Animal Genetics 39:105-111 doi:10.1111/j.1365-2052.2007.01683.x

Heuser K, Nagelhus EA, Taubøll E, Indahl U, Berg PR, Nakken S, Lien S, Gjerstad L, Ottersen OP (2008) DO PATIENTS WITH TEMPORAL LOBE EPILEPSY AND CHILDHOOD FEBRILE SEIZURES CONSTITUTE A GENETIC SUBGROUP? RESULTS FROM AN ASSOCIATION STUDY OF AQUAPORIN-4 AND POTASSIUM CHANNEL GENES. Epilepsia :344-344 doi:

Kauserud H, Stige LC, Vik JO, Økland RH, Høiland K, Stenseth NC (2008) Mushroom fruiting and climate change. Proceedings of the National Academy of Sciences of the United States of America 105:3811-3814 doi:10.1073/pnas.0709037105

Kausrud KL, Mysterud A, Steen H, Vik JO, Østbye E, Cazelles B, Framstad E, Eikeset AM, Mysterud I, Solhøy T, Stenseth NC (2008) Linking climate change to lemming cycles. Nature 456:93-97 doi:10.1038/nature07442

Kobayashi T, Andersen Ø, Pakarinen P, Torgersen JS, Huhtaniemi IT (2008) The gonadotropin receptors FSH-R and LH-R of Atlantic halibut (Hippoglossus hippoglossus) – 2. Differential follicle expression and asynchronous oogenesis. General and Comparative Endocrinology 156:595-602 doi:

Lillehammer M, Goddard ME, Nilsen H, Sehested E, Olsen HG, Lien S, Meuwissen T (2008) Quantitative trait locus-by-environment interaction for milk yield traits on Bos taurus autosome 6. Genetics 179:1539-1546 doi:10.1534/genetics.107.084483

Moe M, Lien S, Bendixen C, Hedegaard J, Hornshøj H, Berget I, Meuwissen T, Grindflek E (2008) Gene expression profiles in liver of pigs with extreme high and low levels of androstenone. BMC Veterinary Research 4:1 pages doi:10.1186/1746-6148-4-29

Moen T, Hayes B, Nilsen F, Nilsen F, Delghandi M, Fjalestad K, Fevolden SE, Berg P, Lien S (2008) Identification and characterisation of novel SNP markers in Atlantic cod: Evidence for directional selection. BMC Genetics 9:18 doi:10.1186/1471-2156-9-18

Moen T, Hayes BJ, Baranski M, Berg PR, Kjøglum S, Koop BF, Davidson WS, Omholt SW, Lien S (2008) A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers. BMC Genomics 9:1 pages doi:10.1186/1471-2164-9-223

Moen T, Hayes BJ, Nilsen F, Delghandi M, Fjalestad KT, Fevolden SE, Berg PR, Lien S (2008) Identification and characterisation of novel SNP markers in Atlantic cod: Evidence for directional selection. BMC Genetics 9:9- doi:

Nilsen H, Hayes BJ, Berg PR, Roseth A, Sundsaasen KK, Nilsen K, Lien S (2008) Construction of a dense SNP map for bovine chromosome 6 to assist the assembly of the bovine genome sequence. Animal Genetics 39:97-104 doi:10.1111/j.1365-2052.2007.01686.x

Olsen HG, Meuwissen T, Nilsen H, Svendsen M, Lien S (2008) Fine Mapping of Quantitative Trait Loci on Bovine Chromosome 6 Affecting Calving Difficulty. Journal of Dairy Science 91:4312-4322 doi:

Opsal MA, Lien S, Brenna-Hansen S, Olsen HG, Våge DI (2008) Association analysis of the constructed linkage maps covering TLR2 and TLR4 with clinical mastitis in Norwegian Red cattle. Journal of Animal Breeding and Genetics 125:110-118 doi:10.1111/j.1439-0388.2007.00704.x

Pierotti M, Knight M, Immler S, Barson NJ, Turner G, Seehausen O (2008) Individual variation in male mating preferences for female coloration in a polymorphic cichlid fish. Behavioral Ecology 19: doi:10.1093/beheco/arm154

Rajasingh H, Gjuvsland AB, Våge DI, Omholt SW (2008) When parameters in dynamic models become phenotypes: A case study on flesh pigmentation in the chinook salmon (Oncorhynchus tshawytscha). Genetics 179:1113-1118 doi:10.1534/genetics.108.087064

Saitoh T, Vik JO, Stenseth NC, Takanishi T, Hayakashi S, Ishida N, Ohmori M, Morita T, Uemura S, Kadomatsu M, Osawa J, Maekawa K (2008) Effects of acorn abundance on density dependence in a Japanese wood mouse (Apodemus speciosus) population. Population Ecology 50: doi:10.1007/s10144-008-0076-6

Samulin-Erdem JM, Berget I, Lien S, Sundvold H (2008) Differential gene expression of fatty acid binding proteins during porcine adipogenesis. Comparative Biochemistry and Physiology – Part B: Biochemistry & Molecular Biology 151:147-152 doi:10.1016/j.cbpb.2008.06.010

Samulin-Erdem JM, Lien S, Grindflek E, Berget I, Ruyter B, Sundvold H (2008) Depot specific differences during adipogenesis of porcine stromal-vascular cells. Cell Biology International 32:525-531 doi:10.1016/j.cellbi.2008.01.001

Sandve SR, Rudi H, Asp T, Rognli OA (2008) Tracking the evolution of a cold stress associated gene family in cold tolerant grasses. BMC Evolutionary Biology 8:1-15 doi:

Vik JO, Brinch C, Boutin S, Stenseth NC (2008) Interlinking hare and lynx dynamics using a century’s worth of annual data. Population Ecology 50:267-274 doi:10.1007/s10144-008-0088-2

Wabnik K, Hvidsten TR, Kedzierska A, Van Leene J, De Jaeger G, Beemster G, Komorowski J, Kuiper M (2008) Gene expression trends and protein features effectively complement each other in gene function prediction. Bioinformatics :8 pages doi:10.1093

Barson NJ, Knight ME, Turner GF (2007) The genetic architecture of male colour differences between a sympatric Lake Malawi cichlid species pair. Journal of Evolutionary Biology 20:45-53 doi:10.1111/j.1420-9101.2006.01228.x

Criscione A, Marletta D, Ådnøy T, Bordonaro S, Guastella A, Lien S, D’Urso G (2007) Characterization of biodiversity in six goat breeds reared in Southern Italy by means of microsatellite and SNP markers. Italian Journal of Animal Science 6:95-97 doi:

Daase M, Vik JO, Bagøien E, Stenseth NC, Eiane K (2007) The influence of advection on Calanus near Svalbard: statistical relations between salinity, temperature and copepod abundance. Journal of Plankton Research 29:903-911 doi:10.1093/plankt/fbm068

Delghandi M, Stenvik J, Moen T, Wesmajervi MS, Westgård JI, Fjalestad K, Kettunen A, Nilsen F (2007) Development and characterisation of microsatellite and single nucleotide polymorphism markers in Atlantic cod (Gadus morhua L.). Aquaculture 272:250- doi:10.1016/j.aquaculture.2007.07.045

Fjellheim S, Blomlie ÅB, Marum P, Rognli OA (2007) Phenotypic variation in local populations and cultivars of meadow fescue – potential for improving cultivars by utilizing wild germplasm. Plant Breeding 126:279-286 doi:

Gjuvsland AB, Hayes BJ, Meuwissen T, Plahte E, Omholt SW (2007) Nonlinear regulation enhances the phenotypic expression of trans-acting genetic polymorphisms. BMC Systems Biology 1:12- doi:

Gjuvsland AB, Hayes BJ, Omholt SW, Carlborg Ö (2007) Statistical epistasis is a generic feature of gene regulatory networks. Genetics 175:411-420 doi:

Gjuvsland AB, Plahte E, Omholt SW (2007) Threshold-dominated regulation hides genetic variation in gene expression networks. BMC Systems Biology 1:14- doi:

Haugland Ø, Mercy IS, Romøren K, Torgersen J, Evensen Ø (2007) Differential expression profiles and gene structure of two tumor necrosis factor-alpha variants in Atlantic salmon (Salmo salar L.). Molecular Immunology 44:1652-1663 doi:

Hayes BJ, Lærdahl JK, Lien S, Moen T, Berg P, Hindar K, Davidson WS, Koop BF, Adzhubei AA, Høyheim B (2007) An extensive resource of single nucleotide polymorphism markers associated with Atlantic salmon (Salmo salar) expressed sequences. Aquaculture 265:82-90 doi:

Hayes BJ, Lærdahl JK, Lien S, Moen T, Berg PR, Hindar K, Davidson WS, Koop BF, Adzhubei AA, Høyheim B (2007) An extensive resource of single nucleotide polymorphism markers associated with Atlantic salmon (Salmo salar) expressed sequences. Aquaculture 265:82-90 doi:10.1016/j.meatsci.2007.03.018

Hayes BJ, Nilsen K, Berg PR, Grindflek E, Lien S (2007) SNP detection exploiting multiple sources of redundancy in large EST collections improves validation rates. Bioinformatics 23:1692-1693 doi:

Jonzén N, Lindén A, Ergon T, Knudsen E, Vik JO, Rubolini D, Piacentini D, Brinch C, Spina F, Karlsson L, Stervander M, Andersson A, Waldenström J, Lehikoinen A, Edvardsen E, Solvang R, Stenseth NC (2007) Response to comment on “Rapid advance of spring arrival dates in long-distance migratory birds”. Science 315:598-598 doi:10.1126/science.1136920

Knudsen E, Lindén A, Ergon T, Jonzén N, Vik JO, Knape J, Røer JE, Stenseth NC (2007) Characterizing bird migration phenology using data from standardized monitoring at bird observatories. Climate Research (CR) 35:59-77 doi:10.3354/cr00714

Lillehammer M, Arnyasi M, Lien S, Olsen HG, Sehested E, Ødegård J, Meuwissen T (2007) A genome scan for quantitative trait locus by environment interactions for production traits. Journal of Dairy Science 90:3482-3489 doi:

Martens H, Kohler A, Afseth NK, Wold JP, Hersleth M, Berget I, Ådnøy T, Skaugen M, Isaksson T, Vegarud G, Criscione A, Mevik BH, Frøst M, Randby ÅT, Prestløkken E, Berg PR, Kent MP, Lien S, Omholt SW (2007) High-throughput Measurements for Functional Genomics of Milk. Journal of Animal and Feed Sciences 16:172- doi:

Moe M, Meuwissen T, Lien S, Bendixen C, Wang X, Conley LN, Berget I, Tajet H, Grindflek E (2007) Gene expression profiles in testis of pigs with extreme high and low levels of androstenone. BMC Genomics 8:16- doi:

Moen T, Sonesson AK, Hayes BJ, Lien S, Munck H, Meuwissen T (2007) Mapping of a quantitative trait locus for resistance against infectious salmon anaemia in Atlantic salmon (Salmo Salar): comparing survival analysis with analysis on affected/resistant data. BMC Genetics 8:13- doi:10.1186/1471-2156-8-53

Olsen HG, Nilsen H, Hayes BJ, Berg PR, Svendsen M, Lien S, Meuwissen T (2007) Genetic support for a quantitative trait nucleotide in the ABCG2 gene affecting milk composition of dairy cattle. BMC Genetics 8:32-40 doi:

Rajasingh H, Våge DI, Pavey SA, Omholt SW (2007) Why are salmonids pink?. Canadian Journal of Fisheries and Aquatic Sciences 64:1614-1627 doi:

Saitoh T, Osawa J, Takanishi T, Hayakashi S, Ohmori M, Morita T, Uemura S, Vik JO, Stenseth NC, Maekawa K (2007) Effects of acorn masting on population dynamics of three forest-dwelling rodent species in Hokkaido, Japan. Population Ecology 49:249-256 doi:10.1007/s10144-007-0041-9

Saski C, Lee SB, Fjellheim S, Guda C, Jansen R, Luo H, Tomkins J, Rognli OA, Daniell H, Clarke JL (2007) Complete chloroplast genome sequences of Hordeum vulgare, Sorghum bicolor and Agrostis stolonifera, and comparative analyses with other grass genomes. Theoretical and Applied Genetics 115:571-590 doi:

Selås V, Vik JO (2007) The arctic fox Alopex lagopus in Fennoscandia: a victim of human-induced changes in interspecific competition and predation?. Biodiversity and Conservation 16:3575-3583 doi:10.1007/s10531-006-9118-6

Semagn K, Skinnes H, Bjørnstad Å, Marøy AG, Tarkegne Y (2007) Quantitative trait loci controlling Fusarium head blight resistance and low deoxynivalenol content in hexaploid wheat population from ‘Arina’ and NK93604. Crop science 47: doi:

Sjøttem E, Rekdal C, Svineng G, Johnsen Ss, Klenow HB, Uglehus Rd, Johansen T (2007) The ePHD protein SPBP interacts with TopBP1 and together they co-operate to stimulate Ets1-mediated transcription. Nucleic Acids Research 35:6648-6662 doi:10.1093/nar/gkm739

Østbye TKK, Andersen Ø, Frang OT, Tooming-Klunderud A, Jakobsen KS, Yafe A, Etzioni S, Moen T (2007) Molecular cloning of the Atlantic salmon activin receptor IIB cDNA – Localization of the receptor and myostatin in vivo and in vitro in muscle cells. Gene 403:159-169 doi:

Østbye TKK, Wetten OF, Tooming-Klunderud A, Jakobsen KS, Yafe A, Etzioni S, Moen T, Andersen Ø (2007) Myostatin (MSTN) gene duplications in Atlantic salmon (Salmo salar): Evidence for different selective pressure on teleost MSTN-1 and -2. Gene 403:159-169 doi:10.1016/j.gene.2007.08.008

Arnyasi M, Grindflek E, Jávor A, Lien S (2006) Investigation of two candidate genes for meat quality traits in a quantitative trait locus region on SSC6: the porcine short heterodimer partner and heart fatty acid binding protein genes. Journal of Animal Breeding and Genetics 123:198203- doi:

Bergem M, Norberg K, Roseth A, Meuwissen T, Lien S, Aamodt R (2006) Chimeric honeybees (Apis mellifera) produced by transplantation of embryonic cells into pre-gastrula stage embryos and detection of chimerism by use of microsatellite markers. Molecular Reproduction and Development 73:475-481 doi:

Bergem M, Roseth A, Lien S, Aamodt R (2006) Quantitative fluorescent PCR (QF-PCR) on microsatellites, a fast and quantitative method to assay chimeric DNA samples in honeybees (Apis mellifera). Apidologie 37:556-563 doi:10.1051/apido:2006033

Edvardsen H, Alnæs GIG, Tsalenko A, Mulcahy T, Yuryev A, Lindersson M, Lien S, Omholt S, Syvänen AC, Børresen-Dale AL, Kristensen VN (2006) Experimental validation of data mined single nucleotide polymorphisms from several databases and consecutive dbSNP builds. Pharmacogenetics & Genomics 16:207-217 doi:

Edvardsen H, Alnæs GIG, Tsalenko A, Mulcahy T, Yuryev A, Lindersson M, Lien S, Omholt SW, Syvänen AC, Børresen-Dale AL, Kristensen VN (2006) Experimental validation of data mined single nucleotide polymorphisms from several databases and consecutive dbSNP builds. Pharmacogenetics (London) 16:207-217 doi:

Fjellheim S, Rognli O, Fosnes K, Brochmann C (2006) Phylogeographical history of the widespread meadow fescue (Festuca pratensis Huds.) inferred from chloroplast DNA sequences. Journal of Biogeography 33: doi:

Fjellheim S, Rognli OA, Fosnes K, Brochmann C (2006) Phylogeographical history of the widespread meadow fescue (Festuca pratensis Huds.) inferred from chloroplast DNA sequences. Journal of Biogeography 33:1470-1478 doi:

Grindflek E, Moe M, Taubert H, Simianer H, Lien S, Moen T (2006) Genome-wide linkage analysis of inguinal hernia in pigs using affected sib pairs. BMC Genetics 7:1-12 doi:10.1186/1471-2156-7-25

Hayes BJ, Gjuvsland AB, Omholt SW (2006) Power of QTL mapping experiments in commercial Atlantic salmon populations, exploiting linkage and linkage disequilibrium and effect of limited recombination in males. Heredity 97:19-26 doi:

Hayes BJ, Hagesæther N, Ådnøy T, Pellerud G, Berg PR, Lien S (2006) Effects on production traits of haplotypes among casein genes in Norwegian goats and evidence for a site of preferential recombination. Genetics 174:455-464 doi:

Hayes BJ, He J, Moen T, Bennewitz J (2006) Use of molecular markers to maximise diversity of founder populations for aquaculture breeding programs. Aquaculture 255: doi:10.1016/j.aquaculture.2005.11.038

Jonzén N, Lindén A, Ergon T, Knudsen E, Vik JO, Rubolini D, Piacentini D, Brinch C, Spina F, Karlsson L, Stervander M, Andersson A, Waldenström J, Lehikoinen A, Edvardsen E, Solvang R, Stenseth NC (2006) Rapid Advance of Spring Arrival Dates in Long-Distance Migratory Birds. Science 312:1959-1961 doi:

Kristensen VN, Edvardsen H, Tsalenko A, Nordgard SH, Sørlie T, Sharan R, Vailaya A, Ben-Dor A, Lønning PE, Lien S, Omholt SW, Syvänen AC, Yakhini Z, Børresen-Dale AL (2006) Genetic variation in putative regulatory loci controlling gene expression in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 103:7735-7740 doi:

Opsal MA, Våge DI, Hayes BJ, Berget I, Lien S (2006) Genomic organization and transcript profiling of the bovine toll-like receptor gene cluster TLR6-TLR1-TLR10. Gene 384:45-50 doi:10.1016/j.gene.2006.06.027

Rajasingh H, Øyehaug L, Våge DI, Omholt SW (2006) Carotenoid dynamics in Atlantic salmon. BMC Biology 4: doi:

Saitoh T, Cazelles B, Vik JO, Viljugrein H, Stenseth NC (2006) Effects of regime shifts on the population dynamics of the grey-sided vole in Hokkaido, Japan. Climate Research (CR) 32:109-118 doi:

Selås V, Vik JO (2006) Possible impact of snow depth and ungulate carcasses on red fox (Vulpes vulpes) populations in Norway, 1897-1976. Journal of Zoology 269:299-308 doi:10.1111/j.1469-7998.2006.00048.x

Semagn K, Bjørnstad Å, Skinnes H, Marøy AG, Tarkegne Y, William M (2006) Distribution of DArT, AFLP, and SSR markers in a genetic linkage map of a doubled-haploid hexaploid wheat population. Genome 49:545-555 doi:

Thorstensen T, Fischer A, Sandvik S, Johnsen S, Grini PE, Reuter G, Aalen RB (2006) The Arabidopsis SUVR4 protein is a nucleolar histone methyltransferase with preference for monomethylated H3K9. Nucleic Acids Research 34:5461-5470 doi:10.1093/nar/gkl687

van Oosterhout C, Joyce D, Cummings SM, Blais J, Barson NJ, Ramnarine IW, Mohammed RS, Persad N, Cable J (2006) Balancing selection, random genetic drift and genetic variation at the major histocompatibiliy complex (MHC) in two wild populations of guppies (Poecilia reticulata). Evolution 60:2562-2574 doi:

Aass L, Veiseth E, Hildrum KI, Hollung K, Lien S (2005) Genetic causes of variation in beef tenderness- preliminary results. ? : doi:

Cable J, van Oosterhout C, Barson NJ, Harris P (2005) Gyrodactylus pictae n. sp. from the Trinidadian swamp guppy Poecilia picta Regan, with a discussion on species of Gyrodactylus von Nordmann, 1832 and their poeciliid hosts. Systematic Parasitology 60:159-164 doi:

Fjellheim S, Rognli OA (2005) Molecular diversity of local Norwegian meadow fescue (Festuca pratensis Huds.) populations and Nordic cultivars?consequences for management and utilisation. Theoretical and Applied Genetics 111:640-650 doi:

Fjellheim S, Rognli OA (2005) Genetic Diversity within and among Nordic Meadow Fescue (Festuca pratensis Huds.) Cultivars Determined on the Basis of AFLP Markers. Crop science 45:2081-2086 doi:

Geesink GH, van der Palen JGP, Kent MP, Veiseth E, Hemke G, Koohmaraie M (2005) Quantification of calpastatin using an optical surface plasmon resonance biosensor. Meat Science 71:537-541 doi:

Haugland Ø, Torgersen J, Syed M, Evensen Ø (2005) Expression profiles of inflammatory and immune-related genes in Atlantic salmon (Salmo salar L.) at early time post vaccination. Vaccine 23:5488-5499 doi:

Kent MP, Veiseth E, Therkildsen M, Koohmaraie M (2005) An assessment of extraction and assay techniques for quantification of calpain and calpastatin from small tissue samples. Journal of Animal Science 83:2182-2188 doi:

Mikalsen AB, Sindre H, Torgersen J, Rimstad E (2005) Protective effects of a DNA vaccine expressing the infectious salmon anemia virus hemagglutinin-esterase in Atlantic salmon. Vaccine 23:4895-4905 doi:

Olsen HG, Lien S, Gautier M, Nilsen H, Roseth A, Berg PR, Sundsaasen KK, Svendsen M, Meuwissen T (2005) Mapping of a milk production quantitative trait locus to a 420-kb region on bovine chromosome 6. Genetics 169:275-283 doi:

Pettorelli N, Vik JO, Mysterud A, Gaillard JM, Tucker CJ, Stenseth NC (2005) Using the satellite-derived NDVI to assess ecological responses to environmental change. Trends in Ecology & Evolution 20:503-510 doi:

Uleberg E, Widerøe IKS, Grindflek E, Szyda J, Lien S, Meuwissen T (2005) Fine mapping of a QTL for intramuscular fat on porcine chromosome 6 using combined linkage and linkage disequilibrium mapping. Journal of Animal Breeding and Genetics 122:1-6 doi:

Våge DI, Fuglei E, Snipstad K, Beheim J, Landsem VM, Klungland H (2005) Two cysteine substitutions in the MC1R generate the blue variant of the arctic fox (Alopex lagopus) and prevent expression of the white winter coat. Peptides 26:1814-1817 doi:

Grindflek E, Hoen N, Sundvold H, Rothschild M, Plastow G, Lien S (2004) Investigation of a peroxisome proliferator-activated receptor gamma haplotype effect on meat quality and carcass traits in pigs. Animal Genetics 35:238-241 doi:

Mikalsen AB, Torgersen J, Aleström P, Hellemann AL, Koppang EO, Rimstad E (2004) Protection of Atlantic salmon Salmo salar against infectious pancreatic necrosis after DNA vaccination. Diseases of Aquatic Organisms 60:11-20 doi:

Moen T, Agresti JJ, Cnaani A, Moses H, Famula TR, Hulata G, Gall GAE, May B (2004) A Genome Scan of a Four-Way Tilapia Cross Supports the Existence of a Quantitative Trait Locus for Cold Tolerance on Linkage Group 23. Aquaculture Research 35:893-904 doi:10.1111/j.1365-2109.2004.01082.x

Moen T, Fjalestad KT, Munck H, Gomez-Raya L (2004) A multistage testing strategy for detection of quantitative trait loci affecting disease resistance in Atlantic salmon. Genetics 167:851-858 doi:10.1534/genetics.103.013227

Moen T, Høyheim B, Munck H, Gomez-Raya L (2004) A linkage map of Atlantic salmon (Salmo salar) reveals anuncommonly large difference in recombination rate between the sexes. Animal Genetics 35:81-92 doi:10.1111/j.1365-2052.2004.01097.x

Olsen HG, Lien S, Svendsen M, Nilsen H, Roseth A, Opsal MA, Meuwissen T (2004) Fine mapping of milk production QTL on BTA6 by combined linkage and linkage disequilibrium analysis. Journal of Dairy Science 87:690-698 doi:

Vik JO, Stenseth NC, Tavecchia G, Mysterud A, Lingjærde OC (2004) Living in synchrony on Greenland coasts?. Nature 427:697-698 doi:

Våge DI, Stavdal E, Beheim J, Klungland H (2004) Why certain silver fox genotypes develop red hairs in their coat. Scientifur 27:79-83 doi:

Fjalestad KT, Moen T, Gomez-Raya L (2003) Prospects for genetic technology in salmon breeding programmes. Aquaculture Research 34:397-406 doi:10.1046/j.1365-2109.2003.00823.x

Klungland H, Våge DI (2003) Pigmentary switches in domestic animal species. Annals of the New York Academy of Sciences 994:331-338 doi:

Komorowski J, Lægreid A, Hvidsten TR (2003) Learning rule-based models from gene expression time profiles annotated using Gene Ontology. Bioinformatics 19:1116-1123 doi:

Lægreid A, Hvidsten T, Midelfart H, Komorowski J, Sandvik AK (2003) Predicting Gene Ontology Biological Prosess From Temporal Gene Expression Patterns. Genome Research :965-979 doi:

Szyda J, Grindflek E, Liu Z, Lien S (2003) Multivariate mixed inheritance models for QTL detection on porcine chromosome 6. ? 81:65-73 doi:

Våge DI, Fleet M, Ponz R, Olsen RT, Monteagudo LV, Tejedor MT, Arruga MV, Gagliardi R, Postiglioni A, Nattrass GS, Klungland H (2003) Mapping and Characterization of the Dominant Black Colour Locus in Sheep. Pigment Cell Research 16:693-697 doi:

Share this:

Like this: